Problem 16d
In a diploid plant species, an F₁ with the genotype Gg Ll Tt is test-crossed to a pure-breeding recessive plant with the genotype gg ll tt. The offspring genotypes are as follows:
What is the interference value for this data set?
Problem 16e
In a diploid plant species, an F₁ with the genotype Gg Ll Tt is test-crossed to a pure-breeding recessive plant with the genotype gg ll tt. The offspring genotypes are as follows:
Explain the meaning of this I value.
Problem 17
The table given here lists the arrangement of alleles of linked genes in dihybrid organisms, the recombination frequency between the genes, and specific gamete genotypes. Using the information provided, determine the expected frequency of the listed gametes. Assume one map unit equals 1% recombination and, when three genes are involved, interference is zero.
Problem 18a
The Rh blood group in humans is determined by a gene on chromosome 1. A dominant allele produces Rh+ blood type, and a recessive allele generates Rh-. Elliptocytosis is an autosomal dominant disorder that produces abnormally shaped red blood cells that have a short life span resulting in hereditary anemia. A large family with elliptocytosis is tested for genetic linkage of Rh blood group and the disease. The lod score data below are obtained for the family.
From these data, can you conclude that Rh and elliptocytosis loci are genetically linked in this family? Why or why not?
Problem 18b
The Rh blood group in humans is determined by a gene on chromosome 1. A dominant allele produces Rh+ blood type, and a recessive allele generates Rh-. Elliptocytosis is an autosomal dominant disorder that produces abnormally shaped red blood cells that have a short life span resulting in hereditary anemia. A large family with elliptocytosis is tested for genetic linkage of Rh blood group and the disease. The lod score data below are obtained for the family.
What is Zₘₐₓ for this family?
Problem 18c
The Rh blood group in humans is determined by a gene on chromosome 1. A dominant allele produces Rh+ blood type, and a recessive allele generates Rh-. Elliptocytosis is an autosomal dominant disorder that produces abnormally shaped red blood cells that have a short life span resulting in hereditary anemia. A large family with elliptocytosis is tested for genetic linkage of Rh blood group and the disease. The lod score data below are obtained for the family.
Over what range of θ do lod scores indicate significant evidence in favor of genetic linkage?
Problem 19a
Genetic linkage mapping for a large number of families identifies 4% recombination between the genes for Rh blood type and elliptocytosis (see Problem 18). At the Rh locus, alleles R and r control Rh+ and Rh- blood types. Allele E producing elliptocytosis is dominant to the wild-type recessive allele e. Tom and Terri each have elliptocytosis, and each is . Tom's mother has elliptocytosis and is Rh- while his father is healthy and has Rh+. Terri's father is Rh+ and has elliptocytosis; Terri's mother is Rh- and is healthy.
What is the probability that the first child of Tom and Terri will be Rh− and have elliptocytosis?
Problem 19b
Genetic linkage mapping for a large number of families identifies 4% recombination between the genes for Rh blood type and elliptocytosis (see Problem 18). At the Rh locus, alleles R and r control Rh+ and Rh- blood types. Allele E producing elliptocytosis is dominant to the wild-type recessive allele e. Tom and Terri each have elliptocytosis, and each is . Tom's mother has elliptocytosis and is Rh- while his father is healthy and has Rh+. Terri's father is Rh+ and has elliptocytosis; Terri's mother is Rh- and is healthy.
What is the probability that a child of Tom and Terri who is Rh+ will have elliptocytosis?
Problem 20
A group of families in which an autosomal dominant condition is present are studied to determine lod scores for possible genetic linkage between three RFLP markers (R1, R2, and R3) and the disease gene. The chart shows lod scores at each of the recombination distances (θ values) tested. Provide an interpretation of the lod score results for each RFLP. Be specific about any significant evidence of genetic linkage.
Problem 21a
Gene R and gene T are genetically linked. Answer the following questions concerning a dihybrid organism with the genotype Rt/rT:
If r = 0.20, give the expected frequencies of gametes produced by the dihybrid.
Problem 21b
Gene R and gene T are genetically linked. Answer the following questions concerning a dihybrid organism with the genotype Rt/rT:
If two crossover events occur between these two genes, what are the genotypes of the recombinant chromosomes?
Problem 21c
Gene R and gene T are genetically linked. Answer the following questions concerning a dihybrid organism with the genotype Rt/rT:
Can you make a general statement about how the occurrence of two crossover events between a given pair of linked genes affects the estimate of recombination frequency?
Problem 22
T. H. Morgan's data on eye color and wing form genetic linkage between the two genes. Test the genetic linkage (shown in the figure below) data with chi-square analysis, and show that the results are significantly different from the expectation under the assumption of independent assortment.
Problem 23a
A wild-type trihybrid soybean plant is crossed to a pure-breeding soybean plant with the recessive phenotypes pale leaf (l), oval seed (r), and short height (t). The results of the three-point test cross are shown below. Traits not listed are wild type.
What are the alleles on each homologous chromosome of the parental wild-type trihybrid soybean plant? Place the alleles in their correct gene order. Use L, R, and T to represent dominant alleles and l, r, and t for recessive alleles.
Problem 23b
A wild-type trihybrid soybean plant is crossed to a pure-breeding soybean plant with the recessive phenotypes pale leaf (l), oval seed (r), and short height (t). The results of the three-point test cross are shown below. Traits not listed are wild type.
Calculate the recombination frequencies between the adjacent genes.
Problem 23c
A wild-type trihybrid soybean plant is crossed to a pure-breeding soybean plant with the recessive phenotypes pale leaf (l), oval seed (r), and short height (t). The results of the three-point test cross are shown below. Traits not listed are wild type.
Calculate the interference value for these data.
Problem 24a
The boss in your laboratory has just heard of a proposal by another laboratory that genes for eye color and the length of body bristles may be linked in Drosophila. Your lab has numerous pure-breeding stocks of Drosophila that could be used to verify or refute genetic linkage. In Drosophila, red eyes (c⁺) are dominant to brown eyes (c) and long bristles (d⁺) are dominant to short bristles (d). Your lab boss asks you to design an experiment to test the genetic linkage of eye color and bristle-length genes, and to begin by crossing a pure-breeding line homozygous for red eyes and short bristles to a pure-breeding line that has brown eyes and long bristles.
Give the genotypes of the pure-breeding parental flies and the genotype(s) and phenotype(s) of the F₁ progeny they produce.
Problem 24b
The boss in your laboratory has just heard of a proposal by another laboratory that genes for eye color and the length of body bristles may be linked in Drosophila. Your lab has numerous pure-breeding stocks of Drosophila that could be used to verify or refute genetic linkage. In Drosophila, red eyes (c⁺) are dominant to brown eyes (c) and long bristles (d⁺) are dominant to short bristles (d). Your lab boss asks you to design an experiment to test the genetic linkage of eye color and bristle-length genes, and to begin by crossing a pure-breeding line homozygous for red eyes and short bristles to a pure-breeding line that has brown eyes and long bristles.
In your experimental design, what are the genotype and phenotype of the line you propose to cross to the F₁ to obtain the most useful information about genetic linkage between the eye color and bristle-length genes? Explain why you make this choice.
Problem 24c
The boss in your laboratory has just heard of a proposal by another laboratory that genes for eye color and the length of body bristles may be linked in Drosophila. Your lab has numerous pure-breeding stocks of Drosophila that could be used to verify or refute genetic linkage. In Drosophila, red eyes (c⁺) are dominant to brown eyes (c) and long bristles (d⁺) are dominant to short bristles (d). Your lab boss asks you to design an experiment to test the genetic linkage of eye color and bristle-length genes, and to begin by crossing a pure-breeding line homozygous for red eyes and short bristles to a pure-breeding line that has brown eyes and long bristles.
Assume the eye color and bristle-length genes are separated by 28 m.u. What are the approximate frequencies of phenotypes expected from the cross you proposed in part (b)?
Problem 24d
The boss in your laboratory has just heard of a proposal by another laboratory that genes for eye color and the length of body bristles may be linked in Drosophila. Your lab has numerous pure-breeding stocks of Drosophila that could be used to verify or refute genetic linkage. In Drosophila, red eyes (c⁺) are dominant to brown eyes (c) and long bristles (d⁺) are dominant to short bristles (d). Your lab boss asks you to design an experiment to test the genetic linkage of eye color and bristle-length genes, and to begin by crossing a pure-breeding line homozygous for red eyes and short bristles to a pure-breeding line that has brown eyes and long bristles.
How would the results of the cross differ if the genes are not linked?
Problem 25a
In rabbits, chocolate-colored fur (w⁺) is dominant to white fur (w), straight fur (c⁺) is dominant to curly fur (c), and long ear (s⁺) is dominant to short ear (s). The cross of a trihybrid rabbit with straight, chocolate-colored fur and long ears to a rabbit that has white, curly fur and short ears produces the following results:
Determine the order of the genes on the chromosome, and identify the alleles that are present on each of the homologous chromosomes in the trihybrid rabbits.
Problem 25b
In rabbits, chocolate-colored fur (w⁺) is dominant to white fur (w), straight fur (c⁺) is dominant to curly fur (c), and long ear (s⁺) is dominant to short ear (s). The cross of a trihybrid rabbit with straight, chocolate-colored fur and long ears to a rabbit that has white, curly fur and short ears produces the following results:
Calculate the recombination frequencies between each of the adjacent pairs of genes.
Problem 25c
In rabbits, chocolate-colored fur (w⁺) is dominant to white fur (w), straight fur (c⁺) is dominant to curly fur (c), and long ear (s⁺) is dominant to short ear (s). The cross of a trihybrid rabbit with straight, chocolate-colored fur and long ears to a rabbit that has white, curly fur and short ears produces the following results:
Determine the interference value for this cross.
Problem 26a
The following progeny are obtained from a test cross of a trihybrid wild-type plant to a plant with the recessive phenotypes compound leaves (c), intercalary leaflets (i), and green fruits (g). (Traits not listed are wild type.) The test-cross progeny are as follows:
Determine the order of the three genes, and construct a genetic map that identifies the correct order and the alleles carried on each chromosome in the trihybrid parental plant.
Problem 26b
The following progeny are obtained from a test cross of a trihybrid wild-type plant to a plant with the recessive phenotypes compound leaves (c), intercalary leaflets (i), and green fruits (g). (Traits not listed are wild type.) The test-cross progeny are as follows:
Calculate the frequencies of recombination between the adjacent genes in the map.
Problem 26c
The following progeny are obtained from a test cross of a trihybrid wild-type plant to a plant with the recessive phenotypes compound leaves (c), intercalary leaflets (i), and green fruits (g). (Traits not listed are wild type.) The test-cross progeny are as follows:
How many double-crossover progeny are expected among the test-cross progeny? Calculate the interference for this cross.
Problem 27a
In tomatoes, the allele T for tall plant height is dominant to dwarf allele t, the P allele for smooth skin is dominant to the p allele for peach fuzz skin, and the allele R for round fruit is dominant to the recessive r allele for oblong fruit. The genes controlling these traits are linked on chromosome 1 in the tomato genome, and the genes are arranged in the order and with the recombination frequencies shown.
A pure-breeding tall, peach fuzz, round plant is crossed to a pure-breeding plant that is dwarf, smooth, oblong. What are the gamete genotypes produced by each of these plants?
Problem 27b
In tomatoes, the allele T for tall plant height is dominant to dwarf allele t, the P allele for smooth skin is dominant to the p allele for peach fuzz skin, and the allele R for round fruit is dominant to the recessive r allele for oblong fruit. The genes controlling these traits are linked on chromosome 1 in the tomato genome, and the genes are arranged in the order and with the recombination frequencies shown.
What are the genotype and phenotype of the F₁ progeny of this cross?
Problem 27c
In tomatoes, the allele T for tall plant height is dominant to dwarf allele t, the P allele for smooth skin is dominant to the p allele for peach fuzz skin, and the allele R for round fruit is dominant to the recessive r allele for oblong fruit. The genes controlling these traits are linked on chromosome 1 in the tomato genome, and the genes are arranged in the order and with the recombination frequencies shown.
What are the genotypes of gametes produced by the F₁, and what is the predicted frequency of each gamete?
Problem 27d
In tomatoes, the allele T for tall plant height is dominant to dwarf allele t, the P allele for smooth skin is dominant to the p allele for peach fuzz skin, and the allele R for round fruit is dominant to the recessive r allele for oblong fruit. The genes controlling these traits are linked on chromosome 1 in the tomato genome, and the genes are arranged in the order and with the recombination frequencies shown.
The F₁ are test-crossed to dwarf, peach fuzz, oblong plants, and 1000 test-cross progeny are produced. What are the phenotypes of test-cross progeny, and what number of progeny is expected in each class?
Ch. 5 - Genetic Linkage and Mapping in Eukaryotes